RefCirc
a reference database for circRNAs validated by experiments

circTulp4 Details
Basic Information
circRNA    circTulp4
Alias    mm9_circ_008009
circBase ID    mmu_circ_0000723
Host gene    Tulp4
Species    mus musculus
Peptide    -
Sequence  AGTTGTAAGAGTCCATCCAGGACCTTCCAGTCATGAATAATCTGATGGCTCCTGAATTAACCGGGAAAACAAACATATCAAGTGCCATTTGAAGACTCTGTCTATCTATGTAAAACCTTTTCTGCACATAGAAGCTTTTCCATAAGAAGACATTCTGAATTTTGCAACTGATGAAGATTAAGCATCAGCTGGAGCACCTTTCCACTGTTGGGGTTGGGAGTCTGTGGAGAACAGTCTGTCACTAATGTCAGATTTTCCTTACAGTGTTCATAAACAAAAGCCAGTTTGCAAAAGAAAAAATTGCACAGATTAACCCTAAAGAATAGCTCCAGTGTAAAGCAGGGGCAGACCTTAAAACTCTGAACCGGAGCTCAGTGACTTTTCCTGTGGTTGTAGCAGGAGTGAGGGGACTGATCTGAAAGGAACAGATTCCTTTGTGTCTTCAGCTATCGGAAGTTTTTTATTTATTGTTTATCTTTTTTCTTTTCTGCATATATATGCCATTTTAAAATACTAATTGGAACTGTCAGTTACAAAATAAATATCAAGAAAAGCCTTTTTTGGTCCAAAGGTGTGAACAGGCTTGCAGGTGAACAGGAAGACATCTTTGGTAAAGCTTGGACCGGTCTTGGGAGATGGTGCATCTTGGAGGGCTCTGCTACACGCCTAGGTGGCTGGTTTAAAGGCTTGCATCGCAGACGGAGACTAATTAATAGACACAGTTCTAAGATTGCTTTTTCATTAACATAGAAACTAGAGAAAGGAGAAACAGAAGCCTGCAGCCTAGTCTGTGTAAGCAAGAAGTAGGACCAAACTGAGGAAACTACTTGGTCCATTTAGATAGCAGTTTATTCATACTCAGTGACCCGCAGGCCTCCACCTCTGCTTGAGGGAAGGGCTTTGCTCCAGTCTCTGTGGCACTGAGGGTGGTTCCAGCCCATGGAGGAGTCATTCTAGGAAGCCCTGTGTTCCTAGGGACACAGGGCCAGGCTTTGAGACAGGAAGCTTCTGGCTGTGAGCAGTGGGGGAAAGAGTGATTTTCTTGTTAAAGCTTTGACCATTGTCTGCATGAGCTCTGGTGTGACTTTGCACGTTAGTGTGCCTTTCCCCTTATGCAACCTTTTCCAGCTTACAGCAGAAACTTGCCGAGTTCAGAAAACGTGCCAGAGGGTGGCTTCAGAGGGAAGATGATCTTGTGTGATCAGTCTCTGCACTTGAACTATTGAATAGAGAAATCCAGCTAGAGGAATTCTTACCGCCTTAAGTTACTTGAAATCTATGTGTTTGTAACCCTTTGTCTCTGGAATTACATTACAAAAAAAACTGGAATCTCAGGCTGAGAATAACGAGGCTGAGTAAAAGCGAAGAGAACTGCCTCTTCATCATCACTTACTAACAGCTCTTTCTCCAAAGGATTGGTGTGGTTTCCCGCTAAGAACTTGAAAATGAGAACGGACCCTGTGTATTTTTAGGCATTACCTTTCTTCGCCGACTGACGTCTTTTATAGAGGAGTTTTTTCACTATGCATTTGGTGGAGCTTTATAAGCTATTGACCTAATTGGACTCTAGATCAGTTGTAACTAAAGGAGAAAAAAACAAACCAACGGAACCCAACCACAAAAATAAGCCAATAAAAGAACTTGGTTTGAAATTCCTCAGTACTTTTAAAGTGAAATACTTCATTGAAAAAAGTATGTATGCAGCAGTGGAACATGGGCCTGTGCTTTGCAGCGATTCCAACATCCTCTGCCTGTCCTGGAAGGGGCGTGTTCCCAAGAGTGAGAAGGAGAAACCTGTGTGCAGAAGGCGCTACTATGAAGAGGGATGGTTGGCCACAGGCAATGGGCGAGGTGTGGTGGGAGTGACTTTCACCTCGAGTCACTGTCGCAGAGATAGGAGTACACCACAGAGAATAAACTTCAACCTGCGAGGCCACAACAGTGAG
Expression
Description  Numerous circRNAs were found as the predominant isoform in brain, such as circTulp4.
Method    qRT-PCR, northern blots
Sample    P19 and SH-SY5Y cells, primary forebrain neurons from CD1 mouse embryos (E17.5-E18.5)
Function
Description  -
Method    -
in vitro    -
in vivo    -
Interaction
Target    -
Type    -
Sample    -
Experiment    -
Description    -
ceRNA target    -
Reference
Pubmed ID    25921068
Trait/Disease    -
Title    Circular RNAs in the Mammalian Brain Are Highly Abundant, Conserved, and Dynamically Expressed.
Authors    Rybak-Wolf A, Stottmeister C, Glazar P, Jens M, Pino N, Giusti S, Hanan M, Behm M, Bartok O, Ashwal-Fluss R, Herzog M, Schreyer L, Papavasileiou P, Ivanov A, Ohman M, Refojo D, Kadener S, Rajewsky N.
Journal    Mol Cell. 2015