RefCirc
a reference database for circRNAs validated by experiments

circ-Phf21a Details
Basic Information
circRNA    circ-Phf21a
Alias    -
circBase ID    -
Host gene    Phf21a
Species    mus musculus
Peptide    -
Sequence  -
Expression
Description  -
Method    -
Sample    -
Function
Description  -
Method    -
in vitro    -
in vivo    -
Interaction
Target    ribosomes
Type    circRNA-protein
Sample    mouse cardiac myocytes
Experiment    RIP
Description    Figure 4C shows a cluster of 4 circular RNAs (Myocd, Slc8a1, Atxn7 and Phf21a) where we see an enrichment of BSJ reads (column 1-4) over linear spliced reads (column 5-8) in the ribosomal IP fraction (column 1-2 and 5-9).
ceRNA target    -
Reference
Pubmed ID    28676412
Trait/Disease    Cardiovascular Disease
Title    Identification of circular RNAs with host gene-independent expression in human model systems for cardiac differentiation and disease.
Authors    Siede D, Rapti K, Gorska AA, Katus HA, Altmuller J, Boeckel JN, Meder B, Maack C, Volkers M, Muller OJ, Backs J, Dieterich C.
Journal    J Mol Cell Cardiol. 2017