RefCirc
a reference database for circRNAs validated by experiments
| circSgms2_2-3 Details |
| Basic Information |
| circRNA | circSgms2_2-3 |
| Alias | KU840805 |
| circBase ID | - |
| Host gene | Sgms2 |
| Species | rattus norvegicus |
| Peptide | - |
| Sequence | TATCCAACGGGCTACGAAAGGGTGCCAAGAAATACCCGGACTACATCCAGATTTCCATGCCCAATGACTCCAGGAACAAGCTTCCCCTAGAGTGGTGGAAAACAGGCATTGCCTTTGTGTACGCTCTCTTCAACCTTATCCTGACAACAGTCATGATCACCGTTGTGCACGAGAGGGTCCCTCCCAAGGAACTCAGCCCTCCACTCCCAGACAAGTTTTTTGATTACGTCGACCGGGTCAAATGGGCATTTTCTGTATCAGAAATAAATGGGATGGTATTAGTTGGGCTATGGCTCACCCAGTGGCTCTTTCTGAGATACAAAAGGGACAATACCATCCTCTGTGGGAAGGAGAACCAGCTTCCTTGTGGTGACTACACAGCAGACCAGAAGGCCACCGTCTACGATTCATATCAGCACACACAGTCTATCCTAAGAGTCCATGTTGATCTTGGAAGTAGAGAGGTTTAAAAGAAGTTCCCACAGAAACCAAGAGCCTTACCATCTCCTTTAGCTCCGAAGGCTGGCGGACAATGGATATCATAGAGACAGCAAAACTTGAAGGTCATTTGGAAAGTCAAACCAACAACTCTACCAACACTTACACAAGCCCCACTGAAGCTGTAGAAGAGGAGGACAAAAATGGCAAGGGTAAACCCAAGACCT |
| Expression |
| Description | Using RT-PCR and Sanger sequencing of rat brain cDNA samples, we were able to detect two circRNAs: circSgms2_2 (665 nt) and circSgms2_2-3 (783 nt). The analysis of the revealed circRNAs circSgms2_2 and circSgms2_2-3 in the brain of rats was conducted by real-time PCR. |
| Method | RT-PCR, sanger sequencing, qRT-PCR |
| Sample | rat brain |
| Reference |
| Pubmed ID | 29294205 |
| Trait/Disease | Sphingomyelin Synthase Activity |
| Title | Developmental stage-specific expression of genes for sphingomyelin synthase in rat brain. |
| Authors | Filippenkov IB, Kolomin TA, Limborska SA, Dergunova LV. |
| Journal | Cell Tissue Res. 2018 |