RefCirc
a reference database for circRNAs validated by experiments

hsa_circ_0001649 Details
Basic Information
circRNA    hsa_circ_0001649
Alias    hsa_circ_001599
circBase ID    hsa_circ_0001649
Host gene    SHPRH
Species    homo sapiens
Peptide    -
Sequence  GGCAGCCATTCTACAAAAGTGGAAGCTGTGGTCAGAACTCTGATGAAAATACAGCTTAGAGATCCAGGGGCCAAAGCACTCGTTTTCTCAACGTGGCAAGATGTATTAGATATTATTTCAAAAGCTCTTACTGACAACAACATGGAATTTGCACAAATCAGTCGTGTTAAGACATTTCAGGAGAACCTTTCAGCATTTAAACGTGATCCCCAAATCAATATTTTGCTGCTGCCCCTGCACACAGGTTCTAATGGATTAACTATCATTGAAGCAACTCATGTTCTCTTGGTGGAGCCCATATTGAACCCTGCCCATGAGCTTCAGGCCATAGGGAGGGTGCACCGAATTGGACAGACAAAACCTACTATTGTACACAGATTCTTAATTAAAGCAACAATAGAAGAAAGAATGCAGGCAATGCTGAAAACTGCTGAGAGAAG
Expression
Description  significantly downregulated in HCC
Method    qRT-PCR, RT-PCR and sanger sequencing
Sample    paired samples of HCC and adjacent liver tissues, HCC-LM3 and MHCC-97L
Function
Description  The area under the ROC curve (AUC) was 0.63. Furthermore, hsa_circ_0001649 expression was correlated with tumor size (p = 0.045) and the occurrence of tumor embolus (p = 0.017) in HCC.
Method    -
in vitro    -
in vivo    -
Interaction
Target    -
Type    -
Sample    -
Experiment    -
Description    -
ceRNA target    -
Reference
Pubmed ID    26600397
Trait/Disease    Hepatocellular Carcinoma
Title    Hsa_circ_0001649: A circular RNA and potential novel biomarker for hepatocellular carcinoma.
Authors    Qin M, Liu G, Huo X, Tao X, Sun X, Ge Z, Yang J, Fan J, Liu L, Qin W.
Journal    Cancer Biomark. 2016