RefCirc
a reference database for circRNAs validated by experiments
| circRNA_1193 Details |
| Basic Information |
| circRNA | circRNA_1193 |
| Alias | - |
| circBase ID | - |
| Host gene | - |
| Species | bombyx mori |
| Peptide | - |
| Sequence | - |
| Expression |
| Description | According to the sequencing results, 6 circRNAs were selected randomly for validation with divergent primers. Distinct products of the expected size were amplified using the divergent primers and confirmed by Sanger sequencing. The results showed that the selected 6 circRNAs in the silkworm midgut had covalently closed, continuous loop structures with neither 5 to 3 polarity nor a polyadenylated tail, which is consistent with predictions. The expression level was induced by BmCPV infection. The expression tendency was consistent with the CircSeq results. |
| Method | qRT-PCR, RNA-seq |
| Sample | silkworm midgut |
| Reference |
| Pubmed ID | 29268657 |
| Trait/Disease | Cytoplasmic Polyhedrosis Virus Infection |
| Title | Identification and characterization of circular RNAs in the silkworm midgut following Bombyx mori cytoplasmic polyhedrosis virus infection. |
| Authors | Hu X, Zhu M, Zhang X, Liu B, Liang Z, Huang L, Xu J, Yu L, Li K, Zar MS, Xue R, Cao G, Gong C. |
| Journal | RNA Biol. 2018 |