RefCirc
a reference database for circRNAs validated by experiments
| circCSPP1 Details |
| Basic Information |
| circRNA | circCSPP1 |
| Alias | - |
| circBase ID | - |
| Host gene | CSPP1 |
| Species | sus scrofa |
| Peptide | - |
| Sequence | - |
| Expression |
| Description | Expression levels of CSPP1 circRNA, containing exons 6-10, were much higher than those of the linear transcript from the CSPP1 gene (3.7-fold higher circRNA expression at E60. The circular nature of CSPP1 circRNAs was confirmed by their resistance to RNase R digestion using northern blot and quantitative PCR at the time-points of highest circRNA expression, E42 and E60 in cortex. |
| Method | qRT-PCR,RNA-seq, northern blots |
| Sample | porcine embryonic brain |
| Reference |
| Pubmed ID | 26541409 |
| Trait/Disease | Porcine Embryonic Brain Development |
| Title | Spatio-temporal regulation of circular RNA expression during porcine embryonic brain development. |
| Authors | Veno MT, Hansen TB, Veno ST, Clausen BH, Grebing M, Finsen B, Holm IE, Kjems J. |
| Journal | Genome Biol. 2015 |