RefCirc
a reference database for circRNAs validated by experiments
| circSGMS1_2-6 Details |
| Basic Information |
| circRNA | circSGMS1_2-6 |
| Alias | KP710931 |
| circBase ID | - |
| Host gene | SGMS1 |
| Species | homo sapiens |
| Peptide | - |
| Sequence | CATATTTAGTCATTCATTTTTGATCAGGAGAAAGAAGACAGCCATCATTTGAAAGGTAAAGCTTCAGCGACTGAAGGAGTGTGGACTTTTTGAATTTCAAGAACAGTAAAGTTGGAACACAGCAGAGGGTGTGTAATAAAATACAGATTGGAAAGAAGACTGATGAAGAAAAATAACAGCATGATTCAGGCACACCATTGAGTTCTTTGGGATGCCCGAAAGTGTCTGGTTGGGAAACATGAAATAGAAGACGAGAACCTGCCTCAGCAAGCGTACCTGAGAATACTTTTAAAGGAACCTGTTGATAAATGCAAAACAGTGGCTGTTGCAGGTGATGGAACTGTACTGGAACAATGGGAGAAGCTGGTAGCTTATAGGAAGCCAAGATGACCAGAATGTTTTTAAATAATCCCGTGACGACAGCATGTACGATCCCTGAATGGGCCCGTGGG |
| Expression |
| Description | As a control of RNA concentration in the R+ and R fractions, we used primers F6/R2 to characterize the level of the circRNA circSGMS1_2-6 (GenBank: KP710931). |
| Method | RT-PCR |
| Sample | cortex renis, spleen, placenta, med. Oblongata, Sub. nigra, frontal cortex, blood, cerebellum, corpus callosum, hippocampus, lobus parietalis and thalamus. |
| Reference |
| Pubmed ID | 29454087 |
| Trait/Disease | Sphingomyelin Synthase Activity |
| Title | Multi-step splicing of sphingomyelin synthase linear and circular RNAs. |
| Authors | Filippenkov IB, Sudarkina OY, Limborska SA, Dergunova LV. |
| Journal | Gene. 2018 |